PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G284800.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 226aa    MW: 25753.8 Da    PI: 4.4166
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G284800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.48.4e-34381701128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyat.gkrknratksgyWkatg 87 
                         lp G+rF+P+++e+vv+yL +k+ +++l++++vike+ +y+++P +Lp+   k+  + +e ++F+ +++ y++ gk ++r+tksgyW   g
  Prupe.1G284800.1.p  38 LPTGYRFDPSEDEIVVYYLFNKILDRELPITDVIKEISVYDHDPDELPNgdfKHGCDCNEAFYFTYTEQIYSSeGKITRRTTKSGYWDLDG 128
                         699*********************************************5444444467799********99963677777*********** PP

                 NAM  88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         +++ev+   ++ +vg  k++vf+kg+ap+g +td +mhe+rl
  Prupe.1G284800.1.p 129 EEEEVKYGnGDITVGFEKVMVFHKGTAPNGIETDFIMHEFRL 170
                         *****99746677***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.15E-3436199IPR003441NAC domain
PROSITE profilePS5100537.16938199IPR003441NAC domain
PfamPF023653.1E-1739170IPR003441NAC domain
PROSITE profilePS510056.129210225IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MALSSPQSTS QVPETEKDFD LLKCSKIENG KKEADVDLPT GYRFDPSEDE IVVYYLFNKI  60
LDRELPITDV IKEISVYDHD PDELPNGDFK HGCDCNEAFY FTYTEQIYSS EGKITRRTTK  120
SGYWDLDGEE EEVKYGNGDI TVGFEKVMVF HKGTAPNGIE TDFIMHEFRL NPLIVPTHVL  180
NDSIRAKIER YVVCRIIHEG ISNYQPTFKL PPGWTARPVD EGEPN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-243319910168Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008221517.11e-165PREDICTED: NAC domain-containing protein 68-like
RefseqXP_008221518.11e-165PREDICTED: NAC domain-containing protein 68-like
TrEMBLM5XIM21e-150M5XIM2_PRUPE; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15772611
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.12e-29NAC-like, activated by AP3/PI